Season
- Season 5 2008-07-10
- Season 4 2007-09-27
- Season 3 2006-07-13
- Season 2 2005-07-15
- Season 1 2004-07-15
- Season 0 2004-07-03
Episode
- Episode 1: Preview to Stargate Atlantis
- Episode 2: From Stargate to Atlantis: A Sci-Fi Lowdown
- Episode 3: Mission 100: Atlantis Reaches a Milestone
- Episode 4: Stargate Atlantis: A Retrospective
- Episode 5: Stargate: Atlantis Set Tour
- Episode 6: Wraithal Discrimination: It’s Not Easy Being Green
- Episode 7: The Diary of Rainbow Sun Francks
- Episode 8: Stargate Atlantis Mission Directive: “Before I Sleep”
- Episode 9: Stargate Atlantis Mission Directive: “Sanctuary"
- Episode 10: Stargate Atlantis Mission Directive: “The Storm/The Eye”
- Episode 11: Stargate Atlantis Mission Directive: “The Siege”
- Episode 12: A Look Back On Season One with Martin Gero
- Episode 13: Stargate Atlantis Mission Directive: “The Siege Pt. 3"
- Episode 14: Stargate Atlantis Mission Directive: “The Intruder”
- Episode 15: Introduction to A Character: Ronon Dex
- Episode 16: Stargate Atlantis Mission Directive: “Instinct”
- Episode 17: Stargate Atlantis - Profile On: David Hewlett
- Episode 18: Stargate Atlantis Stunts
- Episode 19: Road to A Dream with Martin Gero
- Episode 20: Stargate Atlantis - Profile On: Paul McGilllion
- Episode 21: Stargate Atlantis Mission Directive: “Sateda”
- Episode 22: Stargate Atlantis Mission Directive: “Progeny”
- Episode 23: Inside The Stargate Atlantis Visual FX Department
- Episode 24: Stargate Atlantis Profile On: Rachel Luttrell
- Episode 25: Stargate Atlantis Mission Directive: “Phantoms”
- Episode 26: General O’Neill Goes To Atlantis
- Episode 27: Stargate Atlantis Mission Directive: “The Game”
- Episode 28: Stargate Atlantis: Masters Of The Alien: A Look Inside The Masters FX Makeup Studio
- Episode 29: Stargate Atlantis Mission Directive: “First Strike”
- Episode 30: Stargate Atlantis: A Look Back On Season 3 with Martin Gero
- Episode 31: Stargate Atlantis Mission Directive: “Doppelganger”
- Episode 32: A New Leader: Amanda Tapping Joins Atlantis
- Episode 33: Stargate Atlantis Mission Directive: “This Mortal Coil”
- Episode 34: Stargate Atlantis: Bloopers
- Episode 35: Stargate Atlantis Mission Directive: “Quarantine”
- Episode 36: Stargate Atlantis Mission Directive: “Outcast”
- Episode 37: The Making of Trio
- Episode 38: A Look Back On Season Four
- Episode 39: Stargate Atlantis Season Four Deleted Scenes
- Episode 40: Stargate Atlantis Mission Directive: “Search & Rescue”
- Episode 41: Showdown! Ronon V. Tyre
- Episode 42: Bringing The Seed To Life
- Episode 43: Stargate Atlantis Mission Directive: “The Tracker”
- Episode 44: Stargate Atlantis Mission Directive: “Whispers”
- Episode 45: Tricks Of The Trade: Submerging The Stargate
- Episode 46: Joe Flanigan: A Conversation With The Colonel
- Episode 47: Building A Humanoid: With James Robbins & Martin Gero
- Episode 48: Dr. Jackson Goes To Atlantis
- Episode 49: The Life and Death of Michael Kenmore
- Episode 50: Inside The Stargate Costume Department
- Episode 51: Stargate Atlantis Season 5 Deleted Scenes Part One
- Episode 52: Stargate Atlantis Mission Directive: “Brainstorm”
- Episode 53: Stargate Atlantis Goes To Vegas
- Episode 54: Stargate Atlantis Season 5 Deleted Scenes Part Two
- Episode 55: The Doctor Is In: The Return of Paul McGillion
Stargate Atlantis Specials From Stargate to Atlantis: A Sci-Fi Lowdown
With the Ancients' city of Atlantis discovered in the Pegasus Galaxy by Stargate Command, Dr. Elizabeth Weir and Major Sheppard lead a scientific expedition to the ancient abandoned city. Once there, the team not only find themselves unable to contact Earth, but their explorations unexpectedly reawaken the Ancients' deadly enemies, The Wraith, who hunger for this new prey. Now with the help of newfound local allies like Teyla Emmagan, the Atlantis Team sets about to uncover their new home's secrets even as their war of survival against the Wraith begins.
